PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00997.1_g00012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 261aa    MW: 28478.6 Da    PI: 5.3616
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00997.1_g00012.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.9e-101041421351
                              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                              NReA r++R++Kka+ + Le++v+ L+a N++L k+l++
  Rsa1.0_00997.1_g00012.1 104 NREAVRKYREKKKAKAASLEDEVARLTAVNHQLLKRLQS 142
                              **********************************99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-790159IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-13103160No hitNo description
PfamPF077161.0E-11103148IPR004827Basic-leucine zipper domain
CDDcd146861.12E-11104151No hitNo description
SuperFamilySSF579591.25E-6104158No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MEDGELEFSN MGVLLPPTTT CSMDTFFDDL LMMDSSNAAC THTHTCNPTG PENNAHTHTC  60
FHVHTKILPE DNDDSDDKVF STDDTAESCG KKGGDNKRPS SSGNREAVRK YREKKKAKAA  120
SLEDEVARLT AVNHQLLKRL QSQSALEAEV SRLKCLLVDL RGRIDGEIGS FPYQKQPNVP  180
SFSHMMMNPC NVECGDDEVY CLQDGFGQGI NEQGLSGCEF EQLQQCAVAD QNLGNGSSLN  240
SSANVSASNK RKGGHRARKA A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013629327.11e-128PREDICTED: uncharacterized protein LOC106335366
SwissprotQ8VY761e-119BZP19_ARATH; Basic leucine zipper 19
TrEMBLA0A0D3BL851e-128A0A0D3BL85_BRAOL; Uncharacterized protein
STRINGBra034668.1-P1e-125(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM20362879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.12e-94bZIP family protein